PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.H13DK
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 213aa    MW: 24343.8 Da    PI: 9.9803
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.H13DKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.7e-092978248
                     SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48
                     + WT eE + +  +++    +    +Wkt+a++++ g+t+ q+++r++k++
      Araip.H13DK 29 QVWTWEENKAFESVIANCFQDaihnHWKTVAARLP-GKTPAQLQERFLKLM 78
                     68****************999**************.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.61E-92389IPR009057Homeodomain-like
SMARTSM007175.4E-52780IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.3E-62878IPR009057Homeodomain-like
PfamPF002491.5E-62977IPR001005SANT/Myb domain
PROSITE profilePS500906.8293178IPR017877Myb-like domain
CDDcd001673.40E-63178No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MTEQFFNDTW GYQPPLEMIA VVGGHQQHQV WTWEENKAFE SVIANCFQDA IHNHWKTVAA  60
RLPGKTPAQL QERFLKLMTD VNAIKNGNPE NMNIMLPVSA TPLEHSLLSI PVVNATPPLP  120
PPHWTHHQHH RMQAMAPAAD MAVPMHITLL SSSMSGARRE QNQHANSNII QHKPLYAASS  180
NNNKRQQTVH WTLQEHKHVV SPRLRRIRKT MEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.H13DK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972475.13e-88uncharacterized protein LOC110269155
TrEMBLA0A445EIG21e-126A0A445EIG2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-08RAD-like 1