PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.H57JT
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 127aa    MW: 14488.7 Da    PI: 10.0584
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.H57JTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP29.91.9e-09127531
          TCP  5 kdrhskihTkvggRdRRvRlsaecaar 31
                 kdrhskih + g+RdRRvRls+e+ ++
  Araip.H57JT  1 KDRHSKIHISHGLRDRRVRLSSEIVRK 27
                 8**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.1E-8127IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
KDRHSKIHIS HGLRDRRVRL SSEIVRKTCW SSTSPATRSN GFSPVKEEAH QLAQIFETVG  60
AFKDSTLYHF SMFHASHHIQ PVPAIKEEVE GIGLLRAIEL ILLFGLIRFF LVRSFDVKGY  120
VTGVWES
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.H57JT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-