PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.H57LN
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 420aa    MW: 46820.6 Da    PI: 7.3831
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.H57LNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.31.1e-17124211190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY +YAk++GF +++++++  k ++  +++   C++ g re++ k+     r+++ +  gCka++ vk +k  + w++ k++l H+H+++
  Araip.H57LN 124 DFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKA---PTRKNTISAAGCKARIYVKFDKdMQDWVLLKIDLTHSHPCS 211
                  6*******************************************999...88899999************998999************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-15124212IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MAESQEERVS SEDPPLCTSP SRNSLMEVDI VEPLECVASD DSENLSYEQE NFAGDVAGHA  60
HEPSKCFNHV MCFNHVMAAQ LSDVTDVGSN EMELGDELPD HGCLQEDEIP RVGMRFAQLQ  120
MAHDFYVTYA KKAGFATKIR TTTFDKITKA PINQAIHCNR DGIRESRVKA PTRKNTISAA  180
GCKARIYVKF DKDMQDWVLL KIDLTHSHPC SPKKAVHYHE YRQLTMHAKC VIEDNDEAIC  240
MMTDACGSQY TSRVNFGQEC GVRRGVRACT HSTIKRKHTY VKSSHDVSRS DESHVAFKGL  300
CAHFYNVAQE FLGDDEETAL LHVALEETRA KLAVHRAKKR SESVAETQTN IGSQSSNDVG  360
VDDIQGPSKV TTKGRPKSKR LGSALEKSVK NSRRRKQKNS PPFSYIAACC FGRNKGQVDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1391396SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.H57LN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972878.11e-161protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X5R21e-179A0A444X5R2_ARAHY; Uncharacterized protein
TrEMBLA0A444X5R71e-178A0A444X5R7_ARAHY; Uncharacterized protein
TrEMBLA0A444X5Z71e-179A0A444X5Z7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1797626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-11FAR1 family protein