PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.H8W0G
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 280aa    MW: 31037 Da    PI: 5.3878
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.H8W0GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
      Araip.H8W0G 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLSRCSKSCRLRWTNYL 61
                     79********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.2E-25571IPR009057Homeodomain-like
PROSITE profilePS5129425.784965IPR017930Myb domain
SMARTSM007174.0E-151363IPR001005SANT/Myb domain
PfamPF002491.6E-161461IPR001005SANT/Myb domain
SuperFamilySSF466892.88E-191579IPR009057Homeodomain-like
CDDcd001672.26E-111661No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLSRCS KSCRLRWTNY  60
LRPGIKRGQW ERRLQTDIHM AKRALSEALS PENNNNNSNN NNFCSSSSTK AITQSSSLCY  120
ASSAENIARL LKGWMKNPGT NNKCSRTNSS SLTTQNNNFF VVNGGDTASK GSGGSSSNDN  180
SVELSETFES LFGLESLDYS SNATTTTTTT TTTTSDHDHD HDQFSHQSLS PNDENNVFQE  240
NESKPEIIED VMPFSLLEKW LLEEVACQDQ KVITADAKFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.H8W0G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2295701e-60KP229570.1 UNVERIFIED: Boehmeria nivea MYB transcription factor-like (MYB14) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016194275.11e-120myb-related protein 306
TrEMBLA0A444ZPZ41e-119A0A444ZPZ4_ARAHY; Uncharacterized protein
STRINGXP_004489392.17e-56(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101634115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.12e-47myb domain protein 60