PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.H9Q5N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 121aa    MW: 13529.6 Da    PI: 11.1732
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.H9Q5NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.24.4e-09856348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48
                     +WT  E  +lvd+v + G g+W+ I r        Rt  ++k++w+++l
      Araip.H9Q5N  8 AWTLVEVMKLVDGVSRCGAGRWSEIKRLSFsshSYRTSVDLKDKWRNLL 56
                     7***************************999**99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.199160IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-12363IPR009057Homeodomain-like
SuperFamilySSF466891.94E-16362IPR009057Homeodomain-like
SMARTSM007175.7E-8558IPR001005SANT/Myb domain
CDDcd116601.24E-20757No hitNo description
PfamPF002492.5E-6856IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MRRKHHRAWT LVEVMKLVDG VSRCGAGRWS EIKRLSFSSH SYRTSVDLKD KWRNLLKASF  60
AQAPADEGMN VRKHGTAPIP EPILLRVREL AQMNSQAPPN FSSSKFLAGA GNALGDRPGY  120
L
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.H9Q5N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025674370.16e-83uncharacterized protein LOC112775114 isoform X3
TrEMBLA0A444XG912e-81A0A444XG91_ARAHY; Uncharacterized protein
STRINGXP_004510442.11e-67(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF78493040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-42TRF-like 6