PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HF5I3
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 150aa    MW: 16383.2 Da    PI: 10.5018
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HF5I3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00181103123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++Cg  F     L  H+r+H
  Araip.HF5I3  81 HSCSICGLEFAVGQALGGHMRKH 103
                  79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003551.52648IPR015880Zinc finger, C2H2-like
PfamPF139123.0E-92650IPR007087Zinc finger, C2H2
PROSITE profilePS501579.3072653IPR007087Zinc finger, C2H2
SuperFamilySSF576671.38E-82648No hitNo description
PROSITE patternPS0002802848IPR007087Zinc finger, C2H2
SuperFamilySSF576671.38E-876103No hitNo description
SMARTSM003550.2881103IPR015880Zinc finger, C2H2-like
PfamPF139127.0E-881104IPR007087Zinc finger, C2H2
PROSITE profilePS501578.78781108IPR007087Zinc finger, C2H2
PROSITE patternPS00028083103IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MVNCLMLLTK VGETKTNNNP LKGGGFKCKT CHRRFLSFQA LGGHRASHKK LKLMMGADLS  60
CQLPSSSSSS SGNMMTKNKM HSCSICGLEF AVGQALGGHM RKHRNGAMTK SSSDGSIKTR  120
RFNLCLDLNL TPSENDLKLN LKTPMLDCFI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HF5I3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187318.11e-105zinc finger protein ZAT12-like
RefseqXP_025641910.11e-105zinc finger protein ZAT12-like
TrEMBLA0A445A9M51e-104A0A445A9M5_ARAHY; Uncharacterized protein
STRINGGLYMA15G04570.11e-50(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.11e-31C2H2 family protein