PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HGN3R
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 187aa    MW: 21425.9 Da    PI: 8.2248
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HGN3RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31101159259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK++kgse+prsYYrC+s  gC ++k+vers++dp+v+++tY+ eH+h+
  Araip.HGN3R 101 SDGWAWRKYGQKPIKGSEYPRSYYRCSSCkGCLARKQVERSHSDPQVFIVTYTAEHTHP 159
                  6*************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-30100159IPR003657WRKY domain
SuperFamilySSF1182903.14E-26100160IPR003657WRKY domain
SMARTSM007742.0E-36100160IPR003657WRKY domain
PROSITE profilePS5081129.918101161IPR003657WRKY domain
PfamPF031064.7E-27102159IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MDWDLHAIVR GCTNTHQSDN ILGDLNYFQL SPQQEIDERF FKSHQFSETE TITTAIVDDE  60
LEELYKPFYP STTSSHPTSA EVNKVLHLKP SDPTPSKCKR SDGWAWRKYG QKPIKGSEYP  120
RSYYRCSSCK GCLARKQVER SHSDPQVFIV TYTAEHTHPP HPITTIPTNS QAQGTVVGRG  180
WKRRTNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-171011581571WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HGN3R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016202141.11e-136probable WRKY transcription factor 29
RefseqXP_025653810.11e-136probable WRKY transcription factor 29
RefseqXP_029149016.11e-136probable WRKY transcription factor 29
TrEMBLA0A444Z8J61e-134A0A444Z8J6_ARAHY; Uncharacterized protein
STRINGXP_006476490.12e-44(Citrus sinensis)
STRINGGLYMA01G43130.22e-44(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62173150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.18e-33WRKY family protein