PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HJ5NF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 382aa    MW: 43094.7 Da    PI: 8.2285
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HJ5NFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.63.2e-21240333189
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  ++YneY+++ GFsvr+sk  ++     +gei+++ fvCs eg+r+ ++ + ++++  +r+ tr+gC+a++k + ++ +g+w v+++  +HnH++
  Araip.HJ5NF 240 DYYNEYGRSKGFSVRRSKVGRRtkqGAEGEIIWQIFVCSGEGERDGKHMQrEDRKMDPRPITRCGCEARIKAHVDDaSGQWFVEQFCDNHNHPM 333
                  69**************98766643367899**************99988845667779*****************99***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.1E-19240334IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MPRALLFMIP RIWSFVVRNS LSLELGVATC TLLADTQLDS IRLGRVCVEP QLYSTNPHPI  60
HVGESCVGVS VKLRLVDLHG DDGPRWRRTQ DLTARKHRSR SGRLEVHTKG RELTTHDNEI  120
HRYAFSVSLS YLPSDNVGGG MRRNIFQLGV VPPVSPTSNG FVERNYEFSY NFDRVHASQN  180
ADDGMSDKTV PVEEVEAIHR CRAAVRIVDG IGSFGAIEFS SLTVKDVLTT EFTSLQAAYD  240
YYNEYGRSKG FSVRRSKVGR RTKQGAEGEI IWQIFVCSGE GERDGKHMQR EDRKMDPRPI  300
TRCGCEARIK AHVDDASGQW FVEQFCDNHN HPMLDARAVK EGDLHQINSM RKSGLRVPTI  360
FRAFANQSGG FETVGFEIKD YI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HJ5NF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016192260.11e-131protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025608116.11e-133protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025639519.11e-131protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YIB30.0A0A444YIB3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-16FAR1-related sequence 5