PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HTF4R
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 343aa    MW: 36993.1 Da    PI: 9.7495
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HTF4RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.4e-3967127262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprCdstntkfCy+nnyslsqPr+fCkaCrryWtkGG+lrnvPvGgg+r+nkk++
  Araip.HTF4R  67 PEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTKGGTLRNVPVGGGCRRNKKNK 127
                  57889*****************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-3055120IPR003851Zinc finger, Dof-type
PfamPF027012.4E-3370125IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.5971125IPR003851Zinc finger, Dof-type
PROSITE patternPS01361073109IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MVFSSIPVYV DPPNWQQQGN VNDNPHLLPP LPPQVQAGPV GGGGAIAGSI RPGSMADRAR  60
LAKIPPPEAA LKCPRCDSTN TKFCYFNNYS LSQPRHFCKA CRRYWTKGGT LRNVPVGGGC  120
RRNKKNKRSS SRSKSPPNNN NEKQQSSSAI PSNNIPPHEL IGHHQLSHQP PPNLPFMASL  180
QNHLSRYGGG GGVASNMGLS LTDHHPHMGF VGNGGVVDQW RLQQFPFLNG FDSNSSSAAV  240
ASSISYPNTF HHENDHHQGI GGGEAVGSSG LVVGVDIAGN SRVNNNQMQP PVKMEENGAM  300
NLSSRTTTTN LNVSHHHQNH QYYSWNTDMS ALAASSSTPH NLL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HTF4R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187296.10.0dof zinc finger protein DOF3.6 isoform X1
RefseqXP_025641946.10.0dof zinc finger protein DOF3.6
TrEMBLA0A445A9J90.0A0A445A9J9_ARAHY; Uncharacterized protein
STRINGXP_004505871.11e-107(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.13e-42OBF-binding protein 3