PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HYR0N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 380aa    MW: 43511.6 Da    PI: 6.066
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HYR0NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-29144204259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +DgynWrKYGqK++ g+++prsYYrCt++   gC+++k+v+rs+edp++++itY+g+H+++
  Araip.HYR0N 144 EDGYNWRKYGQKDILGAKYPRSYYRCTFRntqGCWATKQVQRSDEDPTIFDITYKGRHTCS 204
                  8**************************998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.779138201IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-29140205IPR003657WRKY domain
SuperFamilySSF1182909.29E-26142205IPR003657WRKY domain
SMARTSM007743.1E-41143205IPR003657WRKY domain
PfamPF031068.7E-27144203IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
STIKLDLVKV INTTTMENDG RWEQNILINE LVQGMEVARR LKEDMNATYS ADTKDLLLQR  60
ILSSYEKALL ILRWNASTSK SQNMSQATAT LFSESPISIS ASPLRDDKDH NQEFKHDSKK  120
RKTMAKWVDQ VRVSFESGLE GPHEDGYNWR KYGQKDILGA KYPRSYYRCT FRNTQGCWAT  180
KQVQRSDEDP TIFDITYKGR HTCSQGNKAV PQPKSPDKHE KLQCHSNEIQ HRQTSEESLT  240
TFGTIMTVKR DMVGNGEMEY PFTFPSTSFG SMAQESYSLI PSTLENESFL SSHFQTHLLY  300
PNMQEFKYLP STSFQMNELD GIYNRPLSES DITEIISTNT STTNSPVPEF NFSLDPVEID  360
PNFPPNTLDF SPRALINKNI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-181452011874Disease resistance protein RRS1
5w3x_D4e-181452011874Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HYR0N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016189427.10.0probable WRKY transcription factor 41
RefseqXP_025636955.10.0probable WRKY transcription factor 41
TrEMBLA0A444ZZJ60.0A0A444ZZJ6_ARAHY; Uncharacterized protein
STRINGGLYMA05G36970.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.18e-64WRKY family protein