PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.I1DFI

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 226aa MW: 26337.2 Da PI: 9.5556

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.I1DFI	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.2	1.3e-13	75	158	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 kfY+ Y+k + Fs++++++++ ++i+++ vC++eg+ +++ + + +t+++ +C a++ v+ +k g w + k++l+H+H Araip.I1DFI 75 KFYKLYSKLADFSTKIRNTTRD--GDKIKNQLIVCTREGRWKSKISP---TLKTNPSAGLNCPARIYVHIMKdVGLWTIFKVVLNHSHL 158 6**************98776..8889********9998777...999**************999************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.6E-10	75	158	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence Send to blast
MNDSTSNQLN DNNLIYSSET NDADEIIFRS LSTRSLSTIE LFYYEYVFSS TRCVVDEKFV 60 PKVGMIFKTL KEAGKFYKLY SKLADFSTKI RNTTRDGDKI KNQLIVCTRE GRWKSKISPT 120 LKTNPSAGLN CPARIYVHIM KDVGLWTIFK VVLNHSHLYC LNRAEMLKQQ RELSMFVRRT 180 IETNEEAGIR PSKTYQSFVA AAGNHRELKL YEDWHIWILV YPGHHF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.I1DFI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016172294.1	1e-100	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445CA22	1e-105	A0A445CA22_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-07	FAR1 family protein