PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.I7YET
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 422aa    MW: 49027.1 Da    PI: 9.4696
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.I7YETgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.95.2e-161398190
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                 kfY++Y+k++GFs++++++++    ++i+++  vC++eg+ +++ +    + +t+++   +C a++ v+ +k  g w ++k++l+H+H+++
  Araip.I7YET 13 KFYKHYSKHAGFSTKIRNTTRD--GDKIKNQLIVCTREGRWKSKISP---TLKTNPSAGLNCLARIYVHIMKdVGLWTISKVVLNHTHPCC 98
                 6****************98776..8889************9998777...999******************999**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.9E-131398IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGMIFKALEE VGKFYKHYSK HAGFSTKIRN TTRDGDKIKN QLIVCTREGR WKSKISPTLK  60
TNPSAGLNCL ARIYVHIMKD VGLWTISKVV LNHTHPCCLD QAEMLKEHRE LSMFVCRTIE  120
IHKEAGIRPS KTYQSFLYED QHIWIPIYLD HHFWAGMRST QRSESMHSFF NKFITRNSSL  180
RQFQAQREFD AVDFHIVIPC ATKSAIEAHF QHLYTHEKFK EVQAQFRGKV NCITRLMHSA  240
LGFTTYEVIE QVSNSTFNKF VVTYDAVSRD VKCHFLLFES RGILYRHSLS VLSFERVDNV  300
APKYILERWS KNIKRRNTHI KSSQDEPLLE PRSKRFDKLV FRSHNICEFA SESEELTGIL  360
HRAFDKFKLN LLDSGSSIQS SSTLYNAPDM NYPREDCTST MIAVTGEPGT NQQPDGSKKY  420
IN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.I7YET
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960283.11e-150protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445DGY80.0A0A445DGY8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.16e-26FAR1 family protein