PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.IDZ3P
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 476aa    MW: 54142.9 Da    PI: 9.0895
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.IDZ3PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1447.5e-1451136190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  kfY++YAk +GFs+r+++++++   +ei+++  +Cs+egk +++ +    +++t+++   +  a++ ++  +  g w ++k++l+H+ +++
  Araip.IDZ3P  51 KFYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNSPARIYIHTLNdVGAWIISKVVLDHSDPCC 136
                  6****************98887..8889*************998877...89999*************988879************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.7E-1151137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MDDSTSDCQL NPGEVDYECE SNEVPEPLSV VDDQLVPKVG MTFTTLEDAG KFYRNYAKAA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGLNSPAR IYIHTLNDVG  120
AWIISKVVLD HSDPCCPSKA EMLKQHRKLS MSIRRTIENN EEAGIRPNLY EDRHIWVPIY  180
LDHHFWAGMR STQRSESMHS FFNKFITRNS SLIQFVKQYD NCLGSREQAE RESDAADFHT  240
VIPCATKSAI EAQFQDAYTH QKFREVQAQF RGKANCITRL KNSTLGYSVY EVGEQVSNSI  300
FNKFVVTYDS VVAEKVKRRY TYIKSSHDEP LMEPRSKRFD QLVFRSQNIC EFASESEELT  360
AILHRAYDNV MAEMESLKAK RKGTSSLSHK DANLESVNEL QSPPRIRTRG RPKNRLGSKL  420
DKQIANATKK KKTKVLSEIN LFDAASAVHS NSSQYQGHVM NYQFRVPAAG DNSFGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.IDZ3P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.10.0protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445CSB70.0A0A445CSB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.28e-17far-red elongated hypocotyls 3