PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.J1A84
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 288aa    MW: 32897.7 Da    PI: 8.5511
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.J1A84genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.26.2e-0972114144
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44 
                  +f+ +Y++++GF v k++s+k+  +g+i + +fvC keg ++++
  Araip.J1A84  72 QFWIDYGRRMGFGVHKQYSNKN-ADGKILSLRFVCAKEGLETRT 114
                  699****************999.8899************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.8E-672115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEGTLAEIGT LMSCDANRRP LQAHFEDNDS SPSTLRMSNN STVSLNAQNM DVEFDWLPKL  60
GKTFNIVEEA WQFWIDYGRR MGFGVHKQYS NKNADGKILS LRFVCAKEGL ETRTNCLVKL  120
GIRYIKACQR KIPQVQDREI ELVDDSGITQ RASFELMSRQ VGGRENIGYT HLDQKNYLRT  180
KRMRSMTYGE AGSLVVNDKR YNELQESLRL LGFGISCCHT IKVLDVTDIE LLPDQYILKR  240
WTRGAMSGLQ TCPKLVRTVT QASDCKEARV FMEKAVEELS KKLMISTN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.J1A84
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025616747.12e-77protein FAR1-RELATED SEQUENCE 5-like
STRINGXP_010684684.15e-36(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-07FAR1-related sequence 12