PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.JK5ZE
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 287aa    MW: 33513.1 Da    PI: 6.6509
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.JK5ZEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.8e-13137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ +  ++G+g+W+ I+r +  ++t+ q+ s+ qky
      Araip.JK5ZE 137 PWTQEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKY 181
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.103130186IPR017930Myb domain
SuperFamilySSF466894.86E-16131186IPR009057Homeodomain-like
TIGRFAMsTIGR015577.7E-17133185IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.3E-10134180IPR009057Homeodomain-like
SMARTSM007179.5E-11134184IPR001005SANT/Myb domain
PfamPF002499.0E-11137181IPR001005SANT/Myb domain
CDDcd001671.10E-7137181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MELESVYPGW NWNWNLLEQE RQSSSREWSK EDNKKFESAL AXXXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXYR ELEEDVNDIE AGRVPVPGYI ASSFTFELLH HHNHDGSRRR  120
PNTPRPSSDQ ERKKGVPWTQ EEHRRFLMGL LKYGKGDWRN ISRNFVVTKT PTQVASHAQK  180
YYIRQKVSSG GKDKRRPSIH DITTLNLAEA TATLDDNNIN KPLSFNESKV QLDWFNHCND  240
DGSVMVFDPN CDHLQEQDLF DCAFHEAYAK LKIPHFNKEA DFGIHAL
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.JK5ZE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086830.0KF208683.1 Arachis hypogaea putative MYB-related protein 29 (MYB29) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016166940.10.0transcription factor DIVARICATA
RefseqXP_016166941.10.0transcription factor DIVARICATA
RefseqXP_025666503.10.0transcription factor DIVARICATA
SwissprotQ8S9H75e-55DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A444YD621e-180A0A444YD62_ARAHY; Uncharacterized protein
STRINGXP_007141798.11e-109(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.22e-50MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]