PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.JKK7J
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 233aa    MW: 25640.9 Da    PI: 8.355
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.JKK7JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.4e-08167206340
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqc 40 
                      +W +eEd ll d v+++G g+W+tIa+  +   +Rt+kq+
      Araip.JKK7J 167 AWPEEEDNLLQDSVQRFGEGNWATIAKGGNfpVKRTAKQI 206
                      699************************9889989999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.992160205IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.9E-9161207IPR009057Homeodomain-like
SuperFamilySSF466892.3E-7163206IPR009057Homeodomain-like
PfamPF002498.5E-7167206IPR001005SANT/Myb domain
CDDcd116607.33E-9168206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MRSENRTPMF SFFFSISLSL SHLHHSSHMI DSLKHFNTDP HKLSSQDDDS DLEYKVEAFP  60
PISTEVASET VACVKVKVTG PIPSPIVMIA SLSESTPSSS KIEAPLTIHA PVCNSSKTSN  120
KGSQSSSLMQ GTEICFLQTL PAVSLTDNIE SKGLDGSNMA SKKRKIAWPE EEDNLLQDSV  180
QRFGEGNWAT IAKGGNFPVK RTAKQIDQDA DVGRWVLPRK ECKSGGRHGR RRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.JKK7J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935053.15e-79uncharacterized protein LOC107461104 isoform X2
TrEMBLA0A445BTR85e-79A0A445BTR8_ARAHY; Uncharacterized protein
TrEMBLA0A445C9405e-79A0A445C940_ARAHY; Uncharacterized protein
STRINGGLYMA04G10185.19e-56(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-22MYB_related family protein