PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.JXK8Q
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 520aa    MW: 56106.6 Da    PI: 9.9694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.JXK8QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-184796255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +gr++AeIrdp +   + r +lg+++taeeAa+a++ a++ l+g
  Araip.JXK8Q 47 RYRGVRRRP-WGRYAAEIRDPQT---KERRWLGTYDTAEEAAQAYDSAARVLRG 96
                 59*******.**********943...4999********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-2847103IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-2147105IPR016177DNA-binding domain
PfamPF008471.1E-114796IPR001471AP2/ERF domain
CDDcd000183.80E-3047103No hitNo description
SMARTSM003806.3E-3247110IPR001471AP2/ERF domain
PROSITE profilePS5103222.62947104IPR001471AP2/ERF domain
PRINTSPR003673.5E-94859IPR001471AP2/ERF domain
PRINTSPR003673.5E-97086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MNQLPQPERH RSDKYSPTAL AVTAVATNLT SKRILQKDGP TPVGPIRYRG VRRRPWGRYA  60
AEIRDPQTKE RRWLGTYDTA EEAAQAYDSA ARVLRGPTAR TNFVYYISPP QPSLIFVTNK  120
NNNKNILNRS SHLLGSQFSF PIHPNQLFNS RNRHLGGSWP DPFSSYSAPS SFSTFQQQRN  180
QQLNSTNMLL PRDFVAPSVS SFFGQHLSYP KGSLVNSSHG GHANPSPSSS VSHHLSYPKR  240
SINSLSSSFT HRLSYPSGGI NSSHGGNANP SLPSSLSQPL SYPKGNLVNS SHGGNAKPSV  300
SSSVSHHLSY PKGSLVNSSH GGNANNPSLP SSLSYSKGSL VNSSHGGNAN NHSVSSSFSH  360
HLSYPKGSLV NSSHGSNAPN YTAPFSSSCL TNTNSLGCGS DNNHKADGSE YSQEFFHHSD  420
SSSGLLEDIV STFLKSPKPT KSECLLLGAP TSPSQDSSHL KAESFPPLSA VSTGQMTKKD  480
EDFNVPLYQD GFHMPQPGLS FGTHFNLYSA TSPAIYMDNG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-19471031471Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.JXK8Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020968576.10.0type-2 histone deacetylase 1-like
TrEMBLA0A445ABY90.0A0A445ABY9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1922325
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-12ERF family protein