PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K2P5I
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 294aa    MW: 33898.1 Da    PI: 10.1324
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K2P5IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.71.1e-24122212291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  fY++Y++  GF +r+ k+ ++ +ng i+++t+ C++eg+r+++  + + ++r+++++ r+gC a++++k++   gkw+v++++ +HnHel p
  Araip.K2P5I 122 FYEQYSRGKGFATRVGKKLRN-KNGDIVRYTYLCNREGFRQKKWLElQGRKREHKVVMRCGCMAEMRIKQNGqMGKWYVSRFVDDHNHELLP 212
                  *****************9999.7777****************98886788899999**************9989***************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-22122212IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MAKERFGLET CVAYLNPAVP SRVEVRRRRR SVRSSPLFKR ALIVFTVPLS PPPCPCHRLV  60
CSCFPRRREE TSLDIGMDEA AFGTKYLDGD GDLGNDVRGS GLARPEEVME MLFNSSDVAA  120
HFYEQYSRGK GFATRVGKKL RNKNGDIVRY TYLCNREGFR QKKWLELQGR KREHKVVMRC  180
GCMAEMRIKQ NGQMGKWYVS RFVDDHNHEL LPPKLVEYLP PHRKMSDVDV AHMDSLRQVG  240
ILVPKIYESL AAQTGGFDHI PFTKRDMYNE MRRQRGMRKG DVNATIRYFE AGAK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K2P5I
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169492.11e-162protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y3D71e-160A0A444Y3D7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-23FAR1-related sequence 5