PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K8KF4
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 357aa    MW: 39458.8 Da    PI: 7.1083
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K8KF4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1860109255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a++ l+g
  Araip.K8KF4  60 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAALILYG 109
                  59****999.**********954...5**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-3660123IPR001471AP2/ERF domain
CDDcd000185.74E-2060117No hitNo description
PfamPF008473.4E-1260107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2960117IPR001471AP2/ERF domain
PROSITE profilePS5103222.45860117IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2160118IPR016177DNA-binding domain
PRINTSPR003672.9E-106172IPR001471AP2/ERF domain
PRINTSPR003672.9E-108399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEISNPNDPQ ETKPTATTAP IPTLSQTPNT SSSSSDNNNP PHNNNRKCKG KGGPDNNKFR  60
YRGVRQRSWG KWVAEIREPR KRTRKWLGTF ATAEDAARAY DRAALILYGS RAQLNLQPSV  120
SVNSNSSNSS SRGGSSSSSS SSTQTLRPLL PRPSGFTFSS GSRFPVVFNG LHNNNNNNNF  180
SAATASGFVP FGVFPFSNGN NNSVVAPPPV QFHHQYSPQV LQIQQQQQLQ QQQQQCHHRH  240
QKADESGGTT SIRLTSHQNN NNNTTNHPSG YVHRPHQESC MVMEEEVLNY SNNNNNLAVD  300
STLSSSEVGA DAVVDPDPDP EPGIGSMWSS LTEEDYPVSL WDYNYNDPYF CLNFEEI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-1961116359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K8KF4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016165560.10.0ethylene-responsive transcription factor ABI4
RefseqXP_025667886.10.0ethylene-responsive transcription factor ABI4
TrEMBLA0A444YDK90.0A0A444YDK9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF88472940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-34ERF family protein