PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.KKN7S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 306aa    MW: 35316.7 Da    PI: 11.2468
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.KKN7SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.65.6e-151197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY++Y+k + Fs++++++++    ++i+++  vCs+eg+ +++ +    + +t+++  ++C  ++ v+  k  g w +++++l+H+H+++p
  Araip.KKN7S 11 KFYKNYSKLASFSTKIRNTTRD--GDKIKNQLIVCSREGRWKSKISP---TLKTNSSAGINCPTMIYVHILKdVGLWTISTVVLNHSHPCCP 97
                 6****************98776..8889************9998777...999****************98879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.1E-121197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MIFKTLEEAK KFYKNYSKLA SFSTKIRNTT RDGDKIKNQL IVCSREGRWK SKISPTLKTN  60
SSAGINCPTM IYVHILKDVG LWTISTVVLN HSHPCCPDRA EMLKQYRELS MFVRRTIETN  120
EEAGIRPSKT YQSFVAAAGS HHELTNQFGS FCRAVRGSAY MDSSLSGSPL LVRDEKHTKE  180
REHTIREVIR QLPSKQRAKR ERIRRGRFSH RDIVCNKISS RGPVSAVYTH EKFRERSSEL  240
HHKINAFHLR FHNIQSRRAG FQLHIQQVFR HLRRSITRGK VPVPAILVKG NTVPPFLERP  300
KLRASG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.KKN7S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445ES605e-94A0A445ES60_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-07FAR1-related sequence 5