PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.KR88K

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 102aa MW: 11464.9 Da PI: 4.8896

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.KR88K	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37	6.7e-12	68	102	3	37
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCR 37 ++i l dl +yF+ pi +A ++L+++lTvLK++CR Araip.KR88K 68 AKIALPDLVEYFDVPIVEALRNLNIGLTVLKKKCR 102 7899******************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02042	3.0E-7	70	102	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MLDSSKEESQ ENSDGHQSSQ EVLPVFNQDL NCRPLDENTT ELIDNKTNVE SLPGFGAKKR 60 RAQSDHIAKI ALPDLVEYFD VPIVEALRNL NIGLTVLKKK CR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.KR88K

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020972690.1	6e-70	protein RKD5-like
TrEMBL	A0A444WUW3	3e-57	A0A444WUW3_ARAHY; Uncharacterized protein
TrEMBL	A0A444WV06	9e-54	A0A444WV06_ARAHY; Uncharacterized protein
STRING	GLYMA01G36360.1	1e-32	(Glycine max)
STRING	XP_007157999.1	1e-32	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9646	30	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	8e-16	RWP-RK domain-containing protein