PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L179T
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 152aa    MW: 17389.5 Da    PI: 5.0718
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L179TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.6e-0979128147
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk 47 
                  +fY++YAk+vGF +r+++++     k+ +  +++   Cs+eg+re++ k+
  Araip.L179T  79 EFYSNYAKKVGFVTRIRNTNFDktrKELKVPINQSIHCSREGYRESRVKA 128
                  6**************999887733345556689************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.9E-779128IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MDTPIFEEAL SGSAYDVREN SIFTDVNVPC LSEDDTPHVE QFNLLNGKES EDAIQKKDDA  60
TVPDHTEIPM EEIPYRAQEF YSNYAKKVGF VTRIRNTNFD KTRKELKVPI NQSIHCSREG  120
YRESRVKAAI RAFTKIGECG FQYISKVNFG LV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L179T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016164230.13e-74protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020967767.12e-75protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XWA01e-73A0A444XWA0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14126217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-07FAR1 family protein