PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L2HWC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 164aa    MW: 18444.4 Da    PI: 8.5954
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L2HWCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.67.2e-07127163139
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+e 
  Araip.L2HWC 127 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREK 163
                  6***************998777..8889********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
VFLILRFGCS SSRASSLVLL HRSFPLPFSL VCSSFTLLFS LSATRASFSI LICCFLKSKF  60
ELVLKIMDHS TSDSQLNPSE VDYEFESNEV SEPVYLQLMA LKPLSVVDDE LVPKVGMTFT  120
TLEDAGKFYR NYAKAAGFST RVRCTNRKGN EIKNQLITCS REKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L2HWC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371785e-71HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.13e-54protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DL617e-67A0A445DL61_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477