PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L7N6R
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 243aa    MW: 28042.3 Da    PI: 4.7523
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L7N6RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.22.1e-21132223191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ ++ + ++++r+ r+ t+t+C a+l+v++++  g+w+v+ +++ HnH+l+p
  Araip.L7N6R 132 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRSLDmDDRSREARSLTQTKCPARLRVNLDYgCGRWKVSCFVESHNHDLTP 223
                  6****************99998.8888***************9998867888999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-19132223IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MISFEFRNWY SAFVGLASTS TEERANAKLM WLRCVGLGKG HLPPTPTVHF LFVEAQPLVV  60
IKEDDVKNDS DNDLGDDFDY QPNVEDDADD NDVDSLDSTN KSEEVCGVKR IADLMVEDIW  120
NLEFRTEDEA CQFYNAYSCW HGFVMRKDDV VRDNQGRIIS RQLVCNKEGW RNMRSLDMDD  180
RSREARSLTQ TKCPARLRVN LDYGCGRWKV SCFVESHNHD LTPPQFAHLV LANRHLTVTD  240
RVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L7N6R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167980.11e-126protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6S21e-118A0A444Y6S2_ARAHY; Uncharacterized protein
TrEMBLA0A445D7E11e-119A0A445D7E1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-20FAR1-related sequence 5