PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L7T89
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 125aa    MW: 14448.5 Da    PI: 10.2281
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L7T89genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.62.2e-141197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY+ YAk + Fs+r++++kk+  ++ei+++  + s+e k +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Araip.L7T89 11 KFYKGYAKATDFSTRVRSTKKK--KNEIKNQLITYSREEKWKSKIS---PTEKTNPTASLNCPARIYIHTLKdVGAWIISKVVLHHSHHCCP 97
                 6****************98887..4446666666677777666655...58999**************998879**************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-111197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MTINTLEDAA KFYKGYAKAT DFSTRVRSTK KKKNEIKNQL ITYSREEKWK SKISPTEKTN  60
PTASLNCPAR IYIHTLKDVG AWIISKVVLH HSHHCCPTQH RELSMSIRRT IENDEEAGIR  120
PSKTY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L7T89
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979233.11e-72protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y5K57e-71A0A444Y5K5_ARAHY; Uncharacterized protein
TrEMBLA0A445CSF61e-70A0A445CSF6_ARAHY; Uncharacterized protein
TrEMBLA0A445D6Z81e-70A0A445D6Z8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.28e-07FAR1-related sequence 4