PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L89G5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 228aa    MW: 25233.8 Da    PI: 5.6153
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L89G5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-05208224117
                  EEETTTTEEESSHHHHH CS
      zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                  ++Cp C+k+F+r  nL+
  Araip.L89G5 208 FSCPVCSKTFNRYNNLQ 224
                  89************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.603.6E-4208223IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MPLHPHYFPS SSSSSSSSFI SNQNSINSSL FSSPSYPLYF SNTRLFSVQL EPPSSSSSSS  60
VAALPPPPSS PPLIEALPFI NTISLKNHSN NNSSDQEVVV DKKRKDNNKK DQENLLADDD  120
YDDNEGVAVA LRIGLPNSVS DNTSGIDDRQ KKKKISSNSE EIVGEKDEVM SVVSEHHPSL  180
LERFNNNKTQ FQYWIPTASQ ILIGPTQFSC PVCSKTFNRY NNLQVTVY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147153DRQKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L89G5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025669265.11e-159zinc finger protein WIP2
TrEMBLA0A444Y1J11e-157A0A444Y1J1_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.19e-17C2H2 family protein