PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.LP41P

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 267aa MW: 30321.2 Da PI: 6.0614

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.LP41P	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.1	6.1e-11	132	175	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + Araip.LP41P 132 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 175 899*********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.8E-14	128	192	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	1.9E-9	129	177	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.622	130	182	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.73E-11	132	186	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.0E-13	132	183	No hit	No description
CDD	cd14703	5.34E-21	133	183	No hit	No description
PROSITE pattern	PS00036	0	135	150	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MPSLTSISTN TNRAQNQQQQ QNPSWVDEFL DFSSARRGAH RRSMSDSIFV ESPRHINNSS 60 SNGDGGGEDE FERFDDYQFM NMFSDEVESD EDESQCNNKA LDNDDDSSKN NNNNSNANAA 120 TTNSSEKITD PKRVKRILAN RQSAQRSRVR KLQYISELER SVTSLQAEVS VLSPRVAFLD 180 HQRLLLNVDN SALKQRIAAL AQDKIFKDAH QEALKREIER LRQVYHQLNV KKNMEIASAT 240 VSPSISPSST RPRCDTQNNE KEQLINV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269\|PubMed:17719007, ECO:0000269\|PubMed:19449183}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.LP41P

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016188168.1	1e-159	basic leucine zipper 61-like
Swissprot	F4IN23	5e-81	BZP34_ARATH; Basic leucine zipper 34
TrEMBL	V7AIM2	1e-104	V7AIM2_PHAVU; Uncharacterized protein
STRING	XP_007132694.1	1e-104	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-63	bZIP family protein

Publications ? help Back to Top
Jiang J,Zhang Z,Cao J Pollen wall development: the associated enzymes and metabolic pathways. Plant Biol (Stuttg), 2013. 15(2): p. 249-63 [PMID:23252839] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]