PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.M1CIY
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 332aa    MW: 37738.7 Da    PI: 6.9037
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.M1CIYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.31.6e-15235317291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  fY++YA+ +GF  ++++skk   +g+     + C++  +r ++  +      t +++ t+C ak++vkk kdgkw++ k++l+HnH+l+p
  Araip.M1CIY 235 FYKRYARLTGFGWKIRTSKKG-FDGRPNYVVLACTRGDRRVSSILT------TLPTQFTKCSAKINVKKGKDGKWMIRKVDLDHNHDLSP 317
                  ****************99987.999999*******98887777666......99999******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-12235317IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDLYPETATS SSPTFASIGR RSLKDMSISE LISVLRADFD TVEEVLLARD AKHKAEISPL  60
YEKIELERLT RLRLESELKT KQEEQRCHKC ERTQEGYEML LKEVKKSGLN DYKNNAIIEE  120
LRNTNRELEI QNNKATDELA TIRIRCSELE NARNEFNEMD FCGSASLQRI KDIGQGQSSS  180
GGLFFKVLDM DSCNNVSGDA AFEAVAEVYS ESDNDGRLEP VPRMEFDSLE AVQTFYKRYA  240
RLTGFGWKIR TSKKGFDGRP NYVVLACTRG DRRVSSILTT LPTQFTKCSA KINVKKGKDG  300
KWMIRKVDLD HNHDLSPLNL KYSGNTTIST LI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.M1CIY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016196937.10.0uncharacterized protein LOC107638264
RefseqXP_025645436.10.0uncharacterized protein LOC112740929
TrEMBLA0A444ZBM30.0A0A444ZBM3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2096123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-11FAR1 family protein