PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.M2XX0
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family STAT
Protein Properties Length: 710aa    MW: 79519.1 Da    PI: 5.784
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.M2XX0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT189.15.1e-592203411122
         STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 
                  ldvvll+ +gqpv+k+ ev asLlyad+ ++ve++ d+eap+L+sydG+ef+s++rp+kll GrasfklkisqLsskcdnrLf ikf++pkl +ypf+
  Araip.M2XX0 220 LDVVLLDVFGQPVDKENEVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFF 317
                  8************************************************************************************************* PP

         STAT  99 eavskpirCisrsrntrsssltkk 122
                  ea+s+pirCisrsrntr s+l++k
  Araip.M2XX0 318 EALSRPIRCISRSRNTRLSTLVWK 341
                  *****************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498995.7E-925172IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:3.30.505.101.5E-6602662IPR000980SH2 domain
SuperFamilySSF555502.05E-8604672IPR000980SH2 domain
PROSITE profilePS500019.722610710IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    Send to blast
MFTDAIGNAG YSLLNDLRAE IEVKDGTFSL CFWVYLANST TFPATIIQQV CSDVSESAPF  60
LVINDHKRIN LLPLLLLHEE APDTGNINSL TEVAYATVDF EFPLQNWVHV GCEVCPNHMK  120
LQINGEIVGE KPLSSNKEPS SNDLRKIVLA NIGGDGNISH GYVYNFQVFP SVSSIKDHHM  180
KDPPLKLSID ESSASEIEEE SDGVWSIVGG KASCRRNFSL DVVLLDVFGQ PVDKENEVYA  240
SLLYADTRAP VENTIDEEAP ILASYDGIEF PSYERPSKLL LGRASFKLKI SQLSSKCDNR  300
LFLIKFCVPK LGNYPFFEAL SRPIRCISRS RNTRLSTLVW KRSPGLPKHN LMQSSGMDDA  360
SFEHQHPVCE AKSNPLTKRF RFGHDKISVS VKADTNLEQP DEECNSHART TNQVENGLTT  420
GLYGTPANYE AYETLSDSES IGERNSPSNN VASRRYPISD MTVFKYCLAG LAERSLMLKE  480
IASLASKKEI SELAHHVSLY SGCSHHGNQI LIAKKLVEDG TNLWKMMSPN NNHVPWESAV  540
YEIEEQFMKI ACSSRSLSHQ DLELLRVIAG CQEYLAQENF EKLWCWLYPV AYIISKERVN  600
PIWNSTSPKW IEGFITKEEA EASLQGPTGL QEPGTFVLRF PTSRSWPHPD AGSLIVTYVG  660
NDYKLHHRLL SVDRVFGSGD KGIDMKPLQA MLMEEPELTR LGRQVIKHSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.M2XX0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197048.10.0uncharacterized protein LOC107638334 isoform X2
RefseqXP_025645294.10.0SH2 domain-containing protein A isoform X2
SwissprotQ56XZ10.0SHB_ARATH; SH2 domain-containing protein B
TrEMBLA0A151R0T30.0A0A151R0T3_CAJCA; Uncharacterized protein
STRINGXP_007133370.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67103036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.20.0SH2 domain protein B
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]