PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.M6DPT
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 131aa    MW: 15480.8 Da    PI: 4.0809
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.M6DPTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.68.3e-0874119147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  +fYn+Y+    F +rk+   +  ++g+i++r++vC+keg r+ +  +
  Araip.M6DPT  74 QFYNAYSCWHRFIMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLD 119
                  6****************99998.8888*************9998777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.7E-574128IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSINEDDVKN DSDNDLGDDF DYQPNAEDDA EDDHVDLLDS TSKSEEVCGV KRIADLMVED  60
IWNLEFRTED EACQFYNAYS CWHRFIMRKD DVVRDNQGRI ISRQLVCNKE GWRNMRYLDL  120
DDRSREARSL T
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.M6DPT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953982.11e-84protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020992779.13e-86protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025702739.12e-84protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445ANA32e-86A0A445ANA3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-09FAR1 family protein