PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.MM455

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 193aa MW: 22210.1 Da PI: 10.4015

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.MM455	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.2	1.3e-13	27	112	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 kfY++Y+k + Fs++++++++ ++i+++ vCs+eg+ +++ + +t+++ +C ak+ v+ +k g w ++k++l+H+ +++ Araip.MM455 27 KFYKHYSKLASFSTKIRNTTRD--GDKIKNQLIVCSREGRWKSKISP---ILKTNPSAGLNCPAKIYVHIMKdVGLWIISKIVLNHSRPCC 112 6**************98776..8889********9998776...99***************999**********98776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.7E-10	27	113	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence Send to blast
MQTSCVVDEK FVPKVGMIFK TLEEAGKFYK HYSKLASFST KIRNTTRDGD KIKNQLIVCS 60 REGRWKSKIS PILKTNPSAG LNCPAKIYVH IMKDVGLWII SKIVLNHSRP CCPDQAEMLK 120 QHKEVSIAVR GLPYMDFGLL GSPLLGRDEK HAKKREYAFI FQQRVSRERI RCCRFSHRDT 180 MCNKISNRGT VYP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.MM455

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016172294.1	9e-78	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445AIQ2	6e-98	A0A445AIQ2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	8e-10	FAR1 family protein