PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.MZJ7P

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 211aa MW: 24460 Da PI: 8.4733

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.MZJ7P	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.4	1.8e-26	44	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA++ GF vr++k ++s+ +++i++r+++C+keg++ + k++ + r++r++ r gC+a+++vk +k gkw+vtk+++eH+H+l+ Araip.MZJ7P 44 NFYDEYARQEGFIVRIDKCHRSEIDNRIISRRLTCNKEGFHVRGKNDkVNPYRKPRVSIREGCEAMMMVKVNKCGKWVVTKFVKEHSHPLM 134 6*************************************98877774678899*********************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.7E-25	44	134	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MELEAELVTA NESSAEKTVG PCVGASILEP YIGMEFDSEA DAKNFYDEYA RQEGFIVRID 60 KCHRSEIDNR IISRRLTCNK EGFHVRGKND KVNPYRKPRV SIREGCEAMM MVKVNKCGKW 120 VVTKFVKEHS HPLMGSGVRS YRTTESKDKR IRQLTKELER RDQQCQQYRK LILSLLETVE 180 EQNKFLSTKV EHVVQCVKQL ENDVQKPLDT S

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.MZJ7P

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016177382.1	1e-157	protein FAR1-RELATED SEQUENCE 5 isoform X1
Refseq	XP_025679343.1	1e-157	protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBL	A0A444XDR6	1e-156	A0A444XDR6_ARAHY; Uncharacterized protein
STRING	GLYMA03G22670.2	3e-89	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF965	31	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-51	FAR1 family protein