PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.N5PZ4
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 345aa    MW: 37520.8 Da    PI: 5.2105
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.N5PZ4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.2e-29150208259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp+ +++t++g Hnh+
  Araip.N5PZ4 150 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERDRSDPTKFIVTFTGVHNHP 208
                  79*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-29138210IPR003657WRKY domain
SuperFamilySSF1182902.09E-25144210IPR003657WRKY domain
PROSITE profilePS5081134.119144210IPR003657WRKY domain
SMARTSM007741.2E-34149209IPR003657WRKY domain
PfamPF031064.5E-24151208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MDDDWDLHAV VRGCATISST TSTTTTTTTT TSYQPPPSSS CGFFNEQQSN VFSVSSNHPF  60
ESRSSVQELQ HNHNLCKPFF FKSQPFQSFQ SSSSSSSPPN SALTQQKHQQ QNCNNGKNPH  120
HAGSATTPRS KRRKNQLKNV CQVSAENLSS DVWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  180
CLARKQVERD RSDPTKFIVT FTGVHNHPAP THRNSLAGSS RQKLQTPEIA TTGDTEMVLT  240
MKPASISASP STSGVEEEAE TEATPAQKSE SEEDNMEDYL MNDDDGGIEE TEFGSPDMEI  300
TDDFFEGLDE LTAATDGDSC FSTSVPNPSL PPFVANSAAT AAGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-18135211380Disease resistance protein RRS1
5w3x_D6e-18135211380Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.N5PZ4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150425e-36AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016186406.10.0WRKY transcription factor 22
RefseqXP_025631499.10.0WRKY transcription factor 22
TrEMBLA0A445ABV60.0A0A445ABV6_ARAHY; Uncharacterized protein
STRINGGLYMA16G03570.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42053259
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-65WRKY family protein