PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P12J8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 172aa    MW: 19747.1 Da    PI: 4.6499
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P12J8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1514.8e-16100169171
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 
                  +fY++YA + GF vr ++ ++  ++g++++r+ vC++ g+r+ee +k+e+ r +r+ tr  C a+++ +++
  Araip.P12J8 100 RFYKTYAMMHGFAVRLDEVRRD-NDGSVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLD 169
                  5****************99998.9999********************9******************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.2E-13100169IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
KANQALPTHL PSPAARSTAA TPTIAATSIL VYLRFWEMDP LDSDFFGSDS DVGFLRGDDL  60
DFLDDDSEAD EDRPQDKRIA ELSQEDIMQL QFTDEEAVYR FYKTYAMMHG FAVRLDEVRR  120
DNDGSVIMRQ IVCNRAGSRK EEVEKDERIR DHRPLTRSCC PARIRARLDT KI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P12J8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016178027.15e-82protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020970171.12e-85protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025684883.15e-82protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025684884.12e-85protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X1Q73e-99A0A444X1Q7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1715827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.17e-10FAR1 family protein