PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P43PI
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 337aa    MW: 38717.5 Da    PI: 5.9086
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P43PIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.77.1e-22216305190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY++YA + GF vr ++ ++   +g++++r+ vC++ g+r+ee +k+e+ + +r+ tr  C+a+++ ++++  +kw+v ++ +eH+Hel+
  Araip.P43PI 216 RFYKTYAMMHGFAVRLDEVRRD-SDGSVIMRQIVCNQAGSRKEEVEKDERIKDHRPLTRSCCRARIRARLDTkIQKWKVVSFYEEHSHELV 305
                  5****************99998.8999********************9***********************989***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-18216305IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
REPSLAADIS VRSVRALEYI AGNVYFFKKC IIHIIQMRGR KLRRTSCLAQ ILEDMLLLVL  60
AESIIVAEQF GSELTTPEID HTYWWIVGAN CGCAPAICIR VAAAVIGYLK TQCTSAPFLS  120
EIERKKQIKL YTPIDPAPPP AATLTIAATS ILVYVHFWEM EPSDNSDEEF LRGDDLDFLD  180
DDSEADKDRP QDKRIAELPR EDIMQLQFTD EEVVYRFYKT YAMMHGFAVR LDEVRRDSDG  240
SVIMRQIVCN QAGSRKEEVE KDERIKDHRP LTRSCCRARI RARLDTKIQK WKVVSFYEEH  300
SHELVAPLDV SMMPEYCTFS VLDKSQAKNL HYIGIRT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P43PI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020970171.11e-104protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025684884.11e-104protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X1I12e-98A0A444X1I1_ARAHY; Uncharacterized protein
TrEMBLA0A444X5W62e-98A0A444X5W6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1715827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-13FAR1 family protein