PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P4GTD
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 222aa    MW: 25641.5 Da    PI: 8.9574
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P4GTDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.5e-082273554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                    +E++RR++++  +++L  llP + + +s+K  l   + + kA++YIk+L
  Araip.P4GTD 22 RRLIEKKRRKHMRMLYSKLNALLPIDHNSTSPKevLPLPDQVDKAINYIKNL 73
                 5689*********************6666666668***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.23E-91588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.21E-41773No hitNo description
PROSITE profilePS5088811.0331773IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-81877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-52373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDQLGSRSEA SPSSTNDKKI ERRLIEKKRR KHMRMLYSKL NALLPIDHNS TSPKEVLPLP  60
DQVDKAINYI KNLKKKVKMA KEKRESLLGM GRKRTRDAGS RRDRPKPPQL EVHEMGSYLQ  120
IVMTCGLDSQ FIFSEIIRIL NEENIDVKSV KSSLVENSMH HVIYAEISQS LLQLGATKVS  180
ERLKRFVNEP TSEIELQSDH QLLDFEIDTD ELAELLDFLE EK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12630KKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P4GTD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025641085.11e-161transcription factor bHLH162-like
TrEMBLA0A445A4W91e-159A0A445A4W9_ARAHY; Uncharacterized protein
STRINGGLYMA06G44660.22e-80(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-17bHLH family protein