PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P5VIS
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 150aa    MW: 17130.1 Da    PI: 4.7918
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P5VISgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.44e-07103144143
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                  +fY+ Y k+ GF + k+k +k+ +n+  t+++fvC ++ +r+ 
  Araip.P5VIS 103 SFYSLYVKMNGFAIWKNKIRKNVKNK-LTQQQFVCFRQEFRDI 144
                  59*******************97776.***********99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.1E-5103144IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MDINLSRAKF RADQVIESAV NHLDGSFSTS NQDCCADEDG GDAFRTGGDA FEYGAFWEED  60
SYPHEYFERG ADGVAKLGCI NFKQITASEI MIFHFLDLLV VFSFYSLYVK MNGFAIWKNK  120
IRKNVKNKLT QQQFVCFRQE FRDIGSNNDG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P5VIS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185380.13e-39protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZKC03e-36A0A444ZKC0_ARAHY; Uncharacterized protein
TrEMBLA0A445AFH95e-36A0A445AFH9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639