PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P8G5K
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 282aa    MW: 30806.3 Da    PI: 6.5373
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P8G5KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20124173255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +grW AeIrdp   ++rkr++lg+f+taeeAa+ ++aa+ k++g
  Araip.P8G5K 124 RFRGVRQRP-WGRWTAEIRDP---NRRKRVWLGTFDTAEEAAAVYDAAAVKFKG 173
                  59*******.**********8...335**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381234.7E-597282IPR017392AP2/ERF transcription factor ERF/PTI6
SuperFamilySSF541712.03E-21124181IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-29124181IPR001471AP2/ERF domain
CDDcd000181.80E-18124181No hitNo description
PROSITE profilePS5103224.197124181IPR001471AP2/ERF domain
SMARTSM003803.0E-34124187IPR001471AP2/ERF domain
PfamPF008472.0E-13124173IPR001471AP2/ERF domain
PRINTSPR003671.5E-10125136IPR001471AP2/ERF domain
PRINTSPR003671.5E-10147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MSAQSTLKLQ TLAIRSSSFD FEGDPPCKTA KRLRSKKLLR IILTDPDATD SESSNDEAEE  60
QNPSPRVKRE IITHIMTPRL HSSHSSSPTA SSSPSSPSIG SGQNHVDRNR FKRKIKRTIS  120
GSGRFRGVRQ RPWGRWTAEI RDPNRRKRVW LGTFDTAEEA AAVYDAAAVK FKGPGAAINF  180
PRGDSEVSGE SFAVVSGEGF VAVSGSREGF ASPTSVLAYD DGVVGGCETT PFEGLRYGDV  240
DAFGFDIDVP LSLMGVNSVL TQRFGKEEFG ELDPEDFLTW PE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-181231811372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P8G5K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020961737.10.0pathogenesis-related genes transcriptional activator PTI6
RefseqXP_025626373.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A445AMB50.0A0A445AMB5_ARAHY; Uncharacterized protein
STRINGXP_004500382.11e-78(Cicer arietinum)
STRINGXP_004500384.11e-78(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-20cytokinin response factor 4