PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.QYG3G
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 189aa    MW: 21631.4 Da    PI: 6.7819
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.QYG3GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.14.4e-1651133182
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 
                  +fY+ ++k  GF vrk  s k   +g++++++f C+ke  re+++ +  +++r +++etrt+Cka+l v ++k d++w+ ++++
  Araip.QYG3G  51 EFYRGFGKLHGFGVRKGDSGKD-CDGNVVRYRFFCNKEALRERKHYDrVDRTRVHKPETRTNCKAMLSVYLDKnDKHWKFQSIN 133
                  6*****************9998.8899**************999988556777799***************99999**999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.9E-1451133IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEVSLSEADG DCGGSDGDAN EVENSDLEDL GGLSVDDILK KVWHIIENAY EFYRGFGKLH  60
GFGVRKGDSG KDCDGNVVRY RFFCNKEALR ERKHYDRVDR TRVHKPETRT NCKAMLSVYL  120
DKNDKHWKFQ SINSVPVMTT CLRSLERHAA SVYTREVFGD VKKEIEGVGA LILITRRRIM  180
NSMIYTLEE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.QYG3G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020987604.11e-78protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6B41e-73A0A444Y6B4_ARAHY; Uncharacterized protein
TrEMBLA0A444Y6K81e-73A0A444Y6K8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210