PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.R3I3B
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 567aa    MW: 61636.4 Da    PI: 7.5113
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.R3I3BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84.1e-32252309260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  Araip.R3I3B 252 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 309
                  8****************************************.***************85 PP
2WRKY106.31.6e-33408466159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Araip.R3I3B 408 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 466
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.674246310IPR003657WRKY domain
SuperFamilySSF1182906.02E-25249310IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.7E-27249310IPR003657WRKY domain
SMARTSM007742.5E-34251309IPR003657WRKY domain
PfamPF031061.0E-24252308IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-37393468IPR003657WRKY domain
SuperFamilySSF1182902.09E-29400468IPR003657WRKY domain
PROSITE profilePS5081138.825403468IPR003657WRKY domain
SMARTSM007743.1E-39408467IPR003657WRKY domain
PfamPF031063.4E-26409466IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MDAAATITAT TSSSGSEHHA RVHEDPNPTG SGLNAEASVG GARYKLMSPA KLPISRSACI  60
TIPPGLSPTS FLESPVLLSN MKAMMYAIFK WEWLFQVAIL IVEPSPTTGS LPRIHQTAHG  120
SMVSAASTAF PITSVCFHNN TVDDRKLSFF EYKPPGRSNM VPSDFNNHES EQSSRIEGPG  180
KAQPFASSPL AESEPADPSN ELSLSSPVQK ISSVEVDLDE FNHKGNTSTG LQASHVEVRG  240
SGAPIAPEKA SDDGYNWRKY GQKLVKGSEF PRSYYKCTHP NCEVKKLFER SHDGQITEII  300
YKGTHDHPKP QPSRRYSAGT GMSVQEERSD KASLAGQDDR ASGMYGRGCQ AADPNSTPEL  360
SPRATNDDSP EGAGFVRMEL GNADITPVVK PIREPRVVVQ TLSEVDILDD GYRWRKYGQK  420
VVRGNPNPRS YYKCTNAGCP VRKHVERASH DPKAVITTYE GKHNHDVPAA RSKSDTISLD  480
LGMGISSATE NRSKGISEYG ESQSQIHTNN NNFKFVHTST PAPAAYFGVL NHSSISYGSR  540
ENRNDAPSLN HSSYPCSQNM GRILTGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-37252469878Probable WRKY transcription factor 4
2lex_A2e-37252469878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.R3I3B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025608450.10.0probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV01e-168WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A445C3750.0A0A445C375_ARAHY; Uncharacterized protein
STRINGGLYMA02G46690.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-170WRKY family protein