PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.R3LNH
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 327aa    MW: 36356.7 Da    PI: 8.0933
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.R3LNHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.5e-082542931756
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                  A+rsR RK+++i+eLe+ v+ L+ae ++   ele l+++ 
  Araip.R3LNH 254 AQRSRVRKLQYIAELERNVQGLQAEGSEVSAELEFLNQQN 293
                  89*******************************9999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-4243302IPR004827Basic-leucine zipper domain
CDDcd147032.05E-17247293No hitNo description
SuperFamilySSF579596.65E-6254296No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-6254297No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MFLTGVGSVF MANSKGSSGI RNLMYSGKHA LLPPKIPFPS VSQAYADYMP NPTVGSKVAQ  60
RPREGNAFHQ RTSSESFIIE EQPSWLDDLL NEPETPVRRG SHRRSSSDSF AYLENTNVSN  120
IGYADKDEFK FRNLGPIPSW SPQDLNHSKD VRHMPMYAEM NSTKIKNRAW DSCLNPPTHP  180
GGVPAVKENV AFQSSGLSCP PHEADGIPST ANEKHDVVES GSQDAKLSSE RKDGSNAKSS  240
ATETDSKRAK QQFAQRSRVR KLQYIAELER NVQGLQAEGS EVSAELEFLN QQNLILSMEN  300
KALKQRLESL AQEQLIKYCK FLPLNIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.R3LNH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1355832e-99BT135583.1 Lotus japonicus clone JCVI-FLLj-21M13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197269.10.0uncharacterized protein At4g06598
RefseqXP_025645642.10.0uncharacterized protein At4g06598
TrEMBLA0A4P1RLW31e-179A0A4P1RLW3_LUPAN; Uncharacterized protein
STRINGGLYMA05G30170.31e-172(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-91bZIP family protein