PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.R55AT

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 230aa MW: 26622.7 Da PI: 9.93

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.R55AT	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.5	1.2e-12	88	144	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 k+ ++++NR++A+rsRqRK ++ +Lee +k ++++ ++L+ ++ +++++ + l s Araip.R55AT 88 KKINKMISNRLSAQRSRQRKVRYLLNLEEQMKIFQEKVTTLRTQITSYTNQKQLLMS 144 7889********************************************999886655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.4E-11	80	142	No hit	No description
SMART	SM00338	5.4E-13	84	148	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.979	86	149	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.02E-11	88	143	No hit	No description
Pfam	PF00170	2.3E-10	88	144	IPR004827	Basic-leucine zipper domain
CDD	cd14703	2.12E-10	89	140	No hit	No description
PROSITE pattern	PS00036	0	92	106	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MENTEMENNV VGATTGNERL SDQTNPKHYK NVHTIIGDCG HGDTNSSYPQ FSKGISVCNP 60 NNGPDDQLVQ FAELILGPNK FDPNMDPKKI NKMISNRLSA QRSRQRKVRY LLNLEEQMKI 120 FQEKVTTLRT QITSYTNQKQ LLMSEQTMLR QKLEAIEKEK SLRNAETKKK NAELKILKEL 180 RMKNELEELF GVPIFNWDSI RHPISSRPNL GQGMCLYIYM KILFLKRKAC

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.R55AT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020982541.1	1e-151	basic leucine zipper 34-like
Refseq	XP_025607843.2	1e-151	basic leucine zipper 34

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF23918	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06850.1	2e-16	basic leucine-zipper 52