PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.R5S93
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 519aa    MW: 58302.7 Da    PI: 6.877
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.R5S93genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.32.7e-27237293360
                  -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  DgynWrKYG K  kg e+prsYYrC+ ++C++kkkv r+  d+k++ i+Y+g+Hnh+k
  Araip.R5S93 237 DGYNWRKYGEKRTKGGENPRSYYRCAEPNCTMKKKVGRNL-DGKIIAIMYKGNHNHPK 293
                  9***************************************.***************85 PP
2WRKY99.91.5e-31374432159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vkg+++pr+YY+C s+gC+vkk+ver+a+d k v +tYeg+Hnh+
  Araip.R5S93 374 LDDGYKWRKYGQKVVKGNPNPRNYYKCVSPGCNVKKHVERAADDIKSVMTTYEGKHNHD 432
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-24225294IPR003657WRKY domain
PROSITE profilePS5081122.182230294IPR003657WRKY domain
SuperFamilySSF1182908.63E-21233294IPR003657WRKY domain
SMARTSM007746.8E-25235293IPR003657WRKY domain
PfamPF031064.4E-21237292IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.9E-35359434IPR003657WRKY domain
SuperFamilySSF1182906.67E-28366434IPR003657WRKY domain
PROSITE profilePS5081136.231369434IPR003657WRKY domain
SMARTSM007742.1E-35374433IPR003657WRKY domain
PfamPF031061.1E-23375432IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MVNIQENESS TSQKQLPNTC MHALTSIHIY ICSQNMHHFL KKERNMSFTT FSGLLSRRYN  60
NISMVDNCWE TSIPRTGSDD NHGEFFSSII YPSYSDFPPG FNPNEFLDAF LSESNSLNWR  120
NSSSENQQSK EEDEKYYSDP SIDVSLLQSS SNIFEEVLFL ILFKFEQGDP QRKQDTFTIL  180
ESGMLVDFSS PMTNTTNFQD PYLRNFSEMA LAVPEIHSTL APQLNCHKSI NEDEDGDGYN  240
WRKYGEKRTK GGENPRSYYR CAEPNCTMKK KVGRNLDGKI IAIMYKGNHN HPKPSKPVGS  300
ANFPLVNELY ASSYTDSVNL NRQSVGGGVE NQLGAHTKRL KGGNGIYSYL FPSGGKAIKE  360
PRVVVQTTTE IDILDDGYKW RKYGQKVVKG NPNPRNYYKC VSPGCNVKKH VERAADDIKS  420
VMTTYEGKHN HDVPQERSSF ASRIASLTNN FATPSSSSSL PLHDTSLSLS SPRANNENQA  480
SQELTTLPFI VGIPNFGRSL IGTSYANEGP SSNNEEKKD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-34237434878Probable WRKY transcription factor 4
2lex_A1e-34237434878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.R5S93
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016184033.10.0probable WRKY transcription factor 26
RefseqXP_025633864.10.0probable WRKY transcription factor 26
TrEMBLA0A445AKV20.0A0A445AKV2_ARAHY; Uncharacterized protein
STRINGGLYMA01G31921.12e-97(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3032322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-68WRKY DNA-binding protein 33