PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.R7L63

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 140aa MW: 16041.1 Da PI: 7.1114

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.R7L63	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.7	2.5e-15	39	124	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 kfY++YAk + Fs+r ++ +k+ +ei+++ +Cs+egk +++ + ++t ++ +C a++ ++ k g w ++k++l+H+H++ Araip.R7L63 39 KFYRDYAKAADFSTRFRSPNKK--GNEIKNQLITCSREGKWKSKISP---IEKTYPTVGLNCPARIYIHTLKdVGAWIISKVVLHHSHPCY 124 6**************98887..8889*********998877...99999*********998879************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.9E-12	39	124	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence Send to blast
MDDSTSDCQL NQGEVDFEFE SNEVHEVGMT FTTLEDAGKF YRDYAKAADF STRFRSPNKK 60 GNEIKNQLIT CSREGKWKSK ISPIEKTYPT VGLNCPARIY IHTLKDVGAW IISKVVLHHS 120 HPCYPSKAEM LKQHRELSIE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.R7L63

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-138	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020992539.1	1e-79	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997160.1	6e-80	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	2e-79	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YSY6	7e-82	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-09	FAR1 family protein