PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.R9F91
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 286aa    MW: 32917.6 Da    PI: 6.6996
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.R9F91genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY22.91.8e-0790115225
                  --SS-EEEEEEE--TT-SS..-EEEE CS
         WRKY   2 dDgynWrKYGqKevkgsef..prsYY 25 
                  +Dg++WrKYGqK+  +s++   r+Y+
  Araip.R9F91  90 EDGHEWRKYGQKMTMNSKYlsGRGYW 115
                  8****************973356665 PP
2WRKY35.12.6e-111461852359
                  EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +YYrC+++   gCp++kkv++ +++p ++ + Y g+Hn++
  Araip.R9F91 146 NYYRCSHKndqGCPATKKVQQIQDNPPLFRTSYFGHHNCK 185
                  7******99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.5E-2179109IPR003657WRKY domain
PROSITE profilePS5081111.49784187IPR003657WRKY domain
SuperFamilySSF1182901.57E-587109IPR003657WRKY domain
SMARTSM007741.0E-2689186IPR003657WRKY domain
SuperFamilySSF815587.59E-9108140IPR001280Photosystem I PsaA/PsaB
PfamPF002234.8E-13109140IPR001280Photosystem I PsaA/PsaB
Gene3DG3DSA:1.20.1130.102.1E-10110140IPR001280Photosystem I PsaA/PsaB
Gene3DG3DSA:2.20.25.806.5E-21145186IPR003657WRKY domain
PfamPF031067.5E-12146185IPR003657WRKY domain
SuperFamilySSF1182904.32E-11146185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015979Biological Processphotosynthesis
GO:0009522Cellular Componentphotosystem I
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MVLLPYAEDL VHQVLRSFTN SLLILNTTTT TKSDAIDHDV FSDGRVVFDS AKFRDFSSTT  60
SSPSLHHTNN NRLRKSSVPT WEKDSPILIE DGHEWRKYGQ KMTMNSKYLS GRGYWQELIE  120
SIVWTHNKLK VAPAIQPRAL YRDVLNYYRC SHKNDQGCPA TKKVQQIQDN PPLFRTSYFG  180
HHNCKSITYN EETILASESF SESSIKEHQF SSSQAFGSKN FISQNQLLLS SSDYYHPLCV  240
YEELGFDYSR HHDPMLSSTE KVQFDNNALG WDLLDYDGLA CYGQQN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.R9F91
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7373156e-41KC737315.1 Exbucklandia populnea voucher BOP017799 photosystem I P700 apoprotein A1 (psaA) gene, partial cds; chloroplast.
GenBankKC7373216e-41KC737321.1 Rhodoleia championii voucher BOP017796 photosystem I P700 apoprotein A1 (psaA) gene, partial cds; chloroplast.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025608177.13e-82probable WRKY transcription factor 62
TrEMBLA0A444Y3L31e-163A0A444Y3L3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2871322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66600.14e-17ABA overly sensitive mutant 3