PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RA8PB
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 83aa    MW: 9346.71 Da    PI: 11.5762
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RA8PBgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-183378150
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                 + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f ++e+Aaka++ a+
  Araip.RA8PB 33 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPSPEMAAKAYDVAA 78
                 68*****887.**********843...6*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-123378IPR001471AP2/ERF domain
PROSITE profilePS5103220.0473483IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-253479IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-173479IPR016177DNA-binding domain
SMARTSM003803.2E-193482IPR001471AP2/ERF domain
CDDcd000181.49E-213578No hitNo description
PRINTSPR003679.9E-103546IPR001471AP2/ERF domain
PRINTSPR003679.9E-105773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MELQTTATTT ATTSTVTAAT KSTINRVGGT RHPVYRGVRK RRWGKWVSEI REPRKKSRIW  60
LGSFPSPEMA AKAYDVAAXX XXY
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RA8PB
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185052.16e-49ethylene-responsive transcription factor ERF023-like
RefseqXP_025631709.12e-48ethylene-responsive transcription factor ERF023
SwissprotQ1ECI23e-29ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A445ACB04e-47A0A445ACB0_ARAHY; Uncharacterized protein
STRINGXP_002523328.13e-32(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63752847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.12e-22ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]