PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RF9E5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 712aa    MW: 81586.7 Da    PI: 6.0618
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RF9E5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.31.1e-17334420191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY +YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ ++   +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Araip.RF9E5 334 KFYMNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISS---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 420
                  6***************998776..8889**************99887...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.8E-15334420IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MFGGFVHFQT KYVTDEVSMR EMFSIYCQTR EQVSCIELYI EFQQSEADQN IEWRDYSSDN  60
KDEFEGNYKI VGPNKDDDEA DDTMETDVRE VANALTNQDL FQEPFFITLL SLGHGVVVAE  120
FPVVTDGEFI VGMEFNFREA VIAAVKDYVI CRCVDYRRKY CWEIRRYNGS HTCIRSSISQ  180
DHSKLDSITI AEAIQPLVEA DPSVKVKSVI TEVQSKFNYT ISYHKVWLTK QKSIEKIFGR  240
WEASYEDLPR WFEAMCHKEL SAAVHFETMP VYRGDDLVPD VRITDHSTSD CQLNPGEVDY  300
EFESNEVPEP LSVVDDELVP KVGMTFTTLE DAGKFYMNYA KAAGFSTRVR CTNRKGNEIK  360
NQLITCSREG KWKSKISSTE KTNPTAGLNC PARIYIHTLK DVGAWIISKV VLDHSHPCCP  420
SKAEMLKQHR ELSMSIRRTI ENNEEADLYE DRHIWVPIYL DHHFWAGMRS TQRSESMHSF  480
FNKYITRNNS LIQFVKQYDN CLGSREQEER ESDAADFHTV IPCATKSSIE AQFQDAYTHQ  540
KFREVQAQFR GKANCITRLT NSALGYSVYE VEEQVSSSIF NKFVVTYNSV AAEELTVILH  600
RSYDNVMAEM ESLKAKRKGT SSLSHENANL ESVNELQSPP RIRTRGRPKN RLGSKLDKQI  660
ANATKKKKTK VLSEINLFDA ASAVHSNSSQ YQGHVMNYQF RVPAAGDNSL GV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RF9E5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445CSB70.0A0A445CSB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-16FAR1 family protein