PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RQ5W2
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 163aa    MW: 18092.1 Da    PI: 10.7318
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RQ5W2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.8e-201160255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +ykGVr ++ +g+W+AeIrdp+    + +r++lg+f taeeAa a+++a+++++g
  Araip.RQ5W2 11 HYKGVRHRP-WGKWAAEIRDPK----KaARVWLGTFQTAEEAALAYDEAALRFKG 60
                 7*****888.**********94....45***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.0E-331069IPR001471AP2/ERF domain
SMARTSM003808.0E-361174IPR001471AP2/ERF domain
PROSITE profilePS5103224.3681168IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-221169IPR016177DNA-binding domain
CDDcd000186.56E-321169No hitNo description
PfamPF008471.6E-131160IPR001471AP2/ERF domain
PRINTSPR003673.6E-111223IPR001471AP2/ERF domain
PRINTSPR003673.6E-113450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MYVYIAVVRR HYKGVRHRPW GKWAAEIRDP KKAARVWLGT FQTAEEAALA YDEAALRFKG  60
SKAKLNFPER VHLTREFGYL TNRPPQPEIG NNNGQQVPST TTTISNASAS QFSGSNNNNF  120
NYALPHLYGN HKNMFVSSSS SSSSSSGFSM QFGGSSSKSP PRN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-271072467ATERF1
3gcc_A2e-271072467ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RQ5W2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020974903.11e-114ethylene-responsive transcription factor ERF114-like isoform X1
RefseqXP_025637564.11e-114ethylene-responsive transcription factor ERF114-like isoform X1
TrEMBLA0A445DT533e-87A0A445DT53_ARAHY; Uncharacterized protein
STRINGXP_008791015.14e-40(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.18e-30ERF family protein