PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.S4KD8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CPP
Protein Properties Length: 580aa    MW: 64450.6 Da    PI: 4.6401
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.S4KD8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR40.45.8e-13279319242
          TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                  +++gC+Ckks Cl +YCeCfaa+ +C+e C+Ce+C N+ee+
  Araip.S4KD8 279 SNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNREEH 319
                  5789*********************************9986 PP
2TCR44.23.8e-14426465342
          TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                  k+ C+Ckk kCl++YCeCf+ + +Cse C Ce+C N+ee+
  Araip.S4KD8 426 KRACTCKKNKCLNLYCECFHGEIYCSEACACEGCLNREEH 465
                  789*********************************9986 PP
3TCR413.9e-13514553140
          TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                  k+++gC+Ck+s+C+++YCeCf+ ++ Cs+ C+C++CkN +
  Araip.S4KD8 514 KHRRGCRCKNSNCMQNYCECFEIEVGCSSLCECKECKNPH 553
                  5899**********************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.7E-10278319IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163414.083279342IPR005172CRC domain
PfamPF036383.3E-9281316IPR005172CRC domain
SMARTSM011141.5E-9424465IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163428.115425554IPR005172CRC domain
PfamPF036381.8E-10427462IPR005172CRC domain
SMARTSM011146.9E-10514555IPR033467Tesmin/TSO1-like CXC domain
PfamPF036384.0E-10517551IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MDSSDEPSSS PLLSDSSNNL NNNNDDLESS KNKNNEDTTT IPSPFESSNP SISNDVENSS  60
PSKHHHDHDL NDDDYFLGES YTPELVLSPE TQSILLSGLR IGDDGDVLED LCDNNFEFNV  120
ESSQEWRDSN LFADEILGIE PSLDHYCSTY PTGNEEDIDL IETVQSEDEV NNRNLVIIDA  180
PIQEEEAPNF KLKPFGLHLN SIIKSTKRVQ PETHENVVVG SSSSNNKIKS ILISQGSNGK  240
SVVRVVVDET QIHQDTTSND SVPISHDLNK RIIQDSSESN NGCTCKKSAC LLLYCECFAA  300
KGYCAECCTC EGCLNREEHE DKVNDARDKI KSRNPFAFSP EMVPQPTHIP SASNQEEEDE  360
AGKDTSRESK PSKFFTYLPR VGLVESNTIS TNSTKHDAGD DNIYKEKLNQ TGGGCKKHAS  420
NTSDGKRACT CKKNKCLNLY CECFHGEIYC SEACACEGCL NREEHLHKIH EAKEYIKRHY  480
PLAFAPRILQ THLSSPNNMD NENVKTATAS SSAKHRRGCR CKNSNCMQNY CECFEIEVGC  540
SSLCECKECK NPHGKNKDSG HKQDAEMDGN EEQIVPPPST
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.S4KD8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020964014.10.0uncharacterized protein LOC107611669
RefseqXP_025670662.10.0uncharacterized protein LOC112770534
TrEMBLA0A444XXZ80.0A0A444XXZ8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3044522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04850.12e-31Tesmin/TSO1-like CXC domain-containing protein