PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.SC297
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 227aa    MW: 25015.4 Da    PI: 7.6705
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.SC297genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.38.3e-10202224123
                  ---SS-EEEEEEE--TT-SS-EE CS
         WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                  ++Dg++WrKYGqKe+ gs++ rs
  Araip.SC297 202 MEDGFTWRKYGQKEILGSKYQRS 224
                  58******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-8197224IPR003657WRKY domain
PROSITE profilePS508118.995197227IPR003657WRKY domain
SuperFamilySSF1182902.35E-7199224IPR003657WRKY domain
PfamPF031068.0E-7203224IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MEEVLNSISH GCELAKKIES EQLPNMANIQ PDILVSSIDE VVKAFNGAKE KLLMTMVNNN  60
LIGASSSSSS SSFAPLFNMH ETQQQMGACA SSFSSMMQEW MMKSSSSTSY AHTMDQVLLQ  120
MQHHQRQPQG FPLIGGAGGG GDLQQLRNVE GSSSMEKSMK GLEVQVHATQ LSPSRPRKRK  180
NDAEKRVVNL PAQQLGNTEM PMEDGFTWRK YGQKEILGSK YQRSLAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.SC297
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016164597.11e-163WRKY transcription factor 55
RefseqXP_025667545.11e-163WRKY transcription factor 55-like
TrEMBLA0A444YA341e-161A0A444YA34_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86293142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-22WRKY DNA-binding protein 55